Vol. 1 No. 1 (2019)

Articles

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  Best Practices for Quantification of Uncertainty and Sampling Quality in Molecular Simulations [Article v1.0]

  Alan Grossfield, Paul N. Patrone, Daniel R. Roe, Andrew J. Schultz, Daniel Siderius, Daniel M. Zuckerman

  5067

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  Why we need the Living Journal of Computational Molecular Science

  Michael R. Shirts, David L. Mobley, Daniel M. Zuckerman

  2031

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  Introduction to Markov state modeling with the PyEMMA software [Article v1.0]

  Christoph Wehmeyer, Martin K. Scherer, Tim Hempel, Brooke E. Husic, Simon Olsson, Frank Noé

  5965

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  Simulation Best Practices for Lipid Membranes [Article v1.0]

  David J. Smith, Jeffery B. Klauda, Alexander J. Sodt

  5966

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  From Proteins to Perturbed Hamiltonians: A Suite of Tutorials for the GROMACS-2018 Molecular Simulation Package [Article v1.0]

  Justin A. Lemkul

  5068

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  Best Practices for Computing Transport Properties 1. Self-Diffusivity and Viscosity from Equilibrium Molecular Dynamics [Article v1.0]

  Edward J. Maginn, Richard A. Messerly, Daniel J. Carlson, Daniel R. Roe, J. Richard Elliot

  6324

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  Best Practices for Foundations in Molecular Simulations [Article v1.0]

  Efrem Braun, Justin Gilmer, Heather B. Mayes, David L. Mobley, Jacob I. Monroe, Samarjeet Prasad, Daniel M. Zuckerman

  5957

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